Can I run an online store under the flat-rate regime?

Q&A • Tax

Can I run an online store under the flat-rate regime?

The flat-rate regime is the most common choice for a small e-commerce. The delicate point is not the threshold but input VAT: you cannot deduct it, so on low-margin products the maths can turn against you.

Short answer

  1. The flat-rate regime applies up to €85,000 of annual revenue.
  2. For retail trade the profitability coefficient is 40%: tax is applied to 40% of revenue, not to actual profit.
  3. The substitute tax is 15%, reduced to 5% for the first five years if the new-business requirements are met.
  4. You do not charge VAT on invoices and cannot deduct VAT on purchases or shipping.
  5. Passing €100,000 in revenue means leaving the regime in the current year itself.

Flat-rate versus standard regime

What changes for an online store

AspectFlat-rateStandard
VAT on salesNot chargedCharged at the product rate
Input VATFull cost, not deductibleDeductible
Deductible costsLump-sum: only the coefficient countsItemised, cost by cost
Suited toHigh margins, few purchasesLow margins, heavy stock

A practical example

Example: a store collects €50,000 in a year. With the 40% coefficient the taxable base is €20,000. Social-security contributions paid are deducted from it; the remainder is taxed at 15% (or 5% in the first five years). But if the goods purchased cost €30,000 plus VAT, that VAT stays a cost: under the standard regime it would have been deducted.

Common mistakes

  • Picking the flat-rate regime by habit on a low-margin catalogue, where non-deductible VAT costs more than the saving.
  • Forgetting that gross revenue, not profit, counts towards the €85,000 threshold.
  • Not watching the €100,000 threshold, which triggers immediate exit and VAT from that point on.
  • Forgetting that sales to consumers in other EU states still follow the distance-selling rules.

How 4shopy helps

  • Prices can be configured with or without displayed VAT, consistently with the chosen regime.
  • The dashboard shows year-to-date revenue, so the threshold does not surprise you in December.
  • Order exports are ready for bookkeeping, with no intermediate spreadsheets.
  • Sales documents are generated in the 4b2b ecosystem carrying the applicable regime wording.